Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 TERF1P1-201ENST00000311003 1181 ntBASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 AC211429.1-201ENST00000415277 523 ntBASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 ATP5G1P1-201ENST00000448724 379 ntBASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 RASA4DP-201ENST00000460726 1199 ntBASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 AC139887.4-201ENST00000607877 719 ntBASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 AC005363.2-201ENST00000618631 242 ntBASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP13A4Q4VNC1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP13A4Q4VNC1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 AC005521.1-201ENST00000393351 872 ntBASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 AC113347.1-201ENST00000413321 391 ntBASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 AL137013.1-201ENST00000432946 1228 ntBASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 COX11P1-201ENST00000489116 835 ntBASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.83■□□□□ 0.6
ATP13A4Q4VNC1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 SPDYE15P-201ENST00000424157 909 ntBASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP13A4Q4VNC1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms