Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 BASP1P1-201ENST00000430708 665 ntBASIC24.17■■□□□ 1.46
COL16A1Q07092 S100A2-206ENST00000497140 697 ntTSL 2 BASIC24.17■■□□□ 1.46
COL16A1Q07092 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
COL16A1Q07092 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC24.17■■□□□ 1.46
COL16A1Q07092 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC24.17■■□□□ 1.46
COL16A1Q07092 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC24.17■■□□□ 1.46
COL16A1Q07092 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL16A1Q07092 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL16A1Q07092 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.16■■□□□ 1.46
COL16A1Q07092 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC24.16■■□□□ 1.46
COL16A1Q07092 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.16■■□□□ 1.46
COL16A1Q07092 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
COL16A1Q07092 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 COX5BP8-201ENST00000416911 349 ntBASIC24.16■■□□□ 1.46
COL16A1Q07092 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC24.16■■□□□ 1.46
COL16A1Q07092 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
COL16A1Q07092 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.16■■□□□ 1.46
COL16A1Q07092 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
COL16A1Q07092 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.16■■□□□ 1.46
COL16A1Q07092 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL16A1Q07092 REM2-202ENST00000536884 1331 ntTSL 2 BASIC24.15■■□□□ 1.46
COL16A1Q07092 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL16A1Q07092 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL16A1Q07092 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC24.15■■□□□ 1.46
COL16A1Q07092 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
COL16A1Q07092 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC24.15■■□□□ 1.46
COL16A1Q07092 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC24.15■■□□□ 1.46
COL16A1Q07092 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.15■■□□□ 1.46
COL16A1Q07092 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.15■■□□□ 1.46
COL16A1Q07092 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC24.15■■□□□ 1.46
COL16A1Q07092 AC125437.2-201ENST00000625180 2167 ntBASIC24.15■■□□□ 1.46
COL16A1Q07092 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL16A1Q07092 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC24.14■■□□□ 1.46
COL16A1Q07092 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.14■■□□□ 1.46
COL16A1Q07092 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL16A1Q07092 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL16A1Q07092 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL16A1Q07092 RAC2-204ENST00000406508 893 ntTSL 5 BASIC24.14■■□□□ 1.46
COL16A1Q07092 NABP1-203ENST00000409510 843 ntTSL 5 BASIC24.14■■□□□ 1.46
COL16A1Q07092 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC24.14■■□□□ 1.46
COL16A1Q07092 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC24.14■■□□□ 1.46
COL16A1Q07092 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC24.14■■□□□ 1.46
COL16A1Q07092 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC24.14■■□□□ 1.46
COL16A1Q07092 AC099522.2-201ENST00000607001 744 ntBASIC24.14■■□□□ 1.46
COL16A1Q07092 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.14■■□□□ 1.46
COL16A1Q07092 AC132938.5-201ENST00000624980 1813 ntBASIC24.14■■□□□ 1.46
COL16A1Q07092 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL16A1Q07092 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.46
COL16A1Q07092 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL16A1Q07092 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL16A1Q07092 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL16A1Q07092 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL16A1Q07092 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL16A1Q07092 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL16A1Q07092 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL16A1Q07092 VMA21-202ENST00000370361 693 ntTSL 5 BASIC24.13■■□□□ 1.45
COL16A1Q07092 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL16A1Q07092 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC24.13■■□□□ 1.45
COL16A1Q07092 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC24.13■■□□□ 1.45
COL16A1Q07092 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL16A1Q07092 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC24.13■■□□□ 1.45
COL16A1Q07092 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC24.13■■□□□ 1.45
COL16A1Q07092 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC24.13■■□□□ 1.45
COL16A1Q07092 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL16A1Q07092 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC24.13■■□□□ 1.45
COL16A1Q07092 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL16A1Q07092 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC24.13■■□□□ 1.45
COL16A1Q07092 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL16A1Q07092 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 KLF2P3-201ENST00000451977 1087 ntBASIC24.13■■□□□ 1.45
COL16A1Q07092 TIMM8BP1-201ENST00000452384 211 ntBASIC24.13■■□□□ 1.45
COL16A1Q07092 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC24.13■■□□□ 1.45
COL16A1Q07092 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL16A1Q07092 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC24.13■■□□□ 1.45
COL16A1Q07092 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC24.13■■□□□ 1.45
COL16A1Q07092 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC24.12■■□□□ 1.45
COL16A1Q07092 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL16A1Q07092 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
COL16A1Q07092 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.12■■□□□ 1.45
COL16A1Q07092 AC112907.3-201ENST00000577781 2400 ntBASIC24.12■■□□□ 1.45
COL16A1Q07092 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL16A1Q07092 HNRNPFP1-201ENST00000391730 1133 ntBASIC24.12■■□□□ 1.45
COL16A1Q07092 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL16A1Q07092 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC24.12■■□□□ 1.45
COL16A1Q07092 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC24.12■■□□□ 1.45
COL16A1Q07092 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC24.12■■□□□ 1.45
COL16A1Q07092 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms