Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDX1P52945 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDX1P52945 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PDX1P52945 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 AC104581.1-202ENST00000635932 2618 ntBASIC17.52■□□□□ 0.4
PDX1P52945 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDX1P52945 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDX1P52945 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.52■□□□□ 0.4
PDX1P52945 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDX1P52945 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDX1P52945 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDX1P52945 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDX1P52945 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDX1P52945 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.52■□□□□ 0.4
PDX1P52945 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDX1P52945 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.52■□□□□ 0.39
PDX1P52945 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PDX1P52945 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.39
PDX1P52945 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDX1P52945 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PDX1P52945 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDX1P52945 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 NEFHP1-201ENST00000412845 2629 ntBASIC17.51■□□□□ 0.39
PDX1P52945 POM121L3P-201ENST00000419331 1163 ntBASIC17.51■□□□□ 0.39
PDX1P52945 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDX1P52945 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.51■□□□□ 0.39
PDX1P52945 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.51■□□□□ 0.39
PDX1P52945 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.51■□□□□ 0.39
PDX1P52945 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDX1P52945 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.51■□□□□ 0.39
PDX1P52945 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
PDX1P52945 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 AC114341.1-201ENST00000618070 349 ntBASIC17.51■□□□□ 0.39
PDX1P52945 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.51■□□□□ 0.39
PDX1P52945 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PDX1P52945 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDX1P52945 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.51■□□□□ 0.39
PDX1P52945 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDX1P52945 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.51■□□□□ 0.39
PDX1P52945 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDX1P52945 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.5■□□□□ 0.39
PDX1P52945 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.5■□□□□ 0.39
PDX1P52945 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PDX1P52945 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 AP000593.1-201ENST00000393668 712 ntBASIC17.5■□□□□ 0.39
PDX1P52945 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 AC096582.2-201ENST00000510860 516 ntBASIC17.5■□□□□ 0.39
PDX1P52945 SLC25A1P1-201ENST00000528351 927 ntBASIC17.5■□□□□ 0.39
PDX1P52945 AP001005.1-201ENST00000571755 1248 ntBASIC17.5■□□□□ 0.39
PDX1P52945 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PDX1P52945 AL773604.1-201ENST00000617417 272 ntBASIC17.5■□□□□ 0.39
PDX1P52945 AC148477.8-201ENST00000624298 468 ntBASIC17.5■□□□□ 0.39
PDX1P52945 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.5■□□□□ 0.39
PDX1P52945 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.5■□□□□ 0.39
PDX1P52945 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDX1P52945 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms