Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
BRCC3P46736 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
BRCC3P46736 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.16■□□□□ 0.66
BRCC3P46736 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BRCC3P46736 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCC3P46736 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BRCC3P46736 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCC3P46736 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BRCC3P46736 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.16■□□□□ 0.66
BRCC3P46736 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCC3P46736 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.16■□□□□ 0.66
BRCC3P46736 FAM197Y8-203ENST00000450145 560 ntBASIC19.16■□□□□ 0.66
BRCC3P46736 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCC3P46736 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.16■□□□□ 0.66
BRCC3P46736 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.16■□□□□ 0.66
BRCC3P46736 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.16■□□□□ 0.66
BRCC3P46736 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.16■□□□□ 0.66
BRCC3P46736 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
BRCC3P46736 HLA-A-201ENST00000376802 1334 ntBASIC19.16■□□□□ 0.66
BRCC3P46736 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCC3P46736 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCC3P46736 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BRCC3P46736 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BRCC3P46736 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCC3P46736 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BRCC3P46736 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BRCC3P46736 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 AC004408.2-201ENST00000623613 2777 ntBASIC19.15■□□□□ 0.66
BRCC3P46736 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCC3P46736 AL662844.1-201ENST00000546340 181 ntBASIC19.15■□□□□ 0.66
BRCC3P46736 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.15■□□□□ 0.66
BRCC3P46736 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.15■□□□□ 0.66
BRCC3P46736 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.15■□□□□ 0.66
BRCC3P46736 AC148477.8-201ENST00000624298 468 ntBASIC19.15■□□□□ 0.66
BRCC3P46736 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.15■□□□□ 0.66
BRCC3P46736 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BRCC3P46736 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.15■□□□□ 0.66
BRCC3P46736 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.15■□□□□ 0.66
BRCC3P46736 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BRCC3P46736 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCC3P46736 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCC3P46736 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BRCC3P46736 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRCC3P46736 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
BRCC3P46736 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRCC3P46736 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
BRCC3P46736 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
BRCC3P46736 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.14■□□□□ 0.65
BRCC3P46736 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.14■□□□□ 0.65
BRCC3P46736 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.14■□□□□ 0.65
BRCC3P46736 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.14■□□□□ 0.65
BRCC3P46736 MTDHP3-201ENST00000594186 672 ntBASIC19.14■□□□□ 0.65
BRCC3P46736 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
BRCC3P46736 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRCC3P46736 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.14■□□□□ 0.65
BRCC3P46736 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms