Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC1A3P43003 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A3P43003 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A3P43003 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC1A3P43003 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A3P43003 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC1A3P43003 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A3P43003 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A3P43003 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC1A3P43003 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SLC1A3P43003 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC1A3P43003 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SLC1A3P43003 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 AL096828.2-201ENST00000567259 1965 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC1A3P43003 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC1A3P43003 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SLC1A3P43003 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 TERF1P1-201ENST00000311003 1181 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC1A3P43003 BX664615.1-201ENST00000443558 458 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 COX11P1-201ENST00000489116 835 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 AC034232.1-201ENST00000506026 1064 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC1A3P43003 GCSHP2-201ENST00000560971 527 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 REXO1L9P-201ENST00000604264 2108 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 PRORSD1P-202ENST00000563365 2154 ntBASIC16.62■□□□□ 0.25
SLC1A3P43003 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC1A3P43003 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC1A3P43003 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SLC1A3P43003 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC1A3P43003 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC1A3P43003 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC1A3P43003 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC1A3P43003 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC1A3P43003 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 AL024508.2-201ENST00000607749 1894 ntBASIC16.61■□□□□ 0.25
SLC1A3P43003 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC1A3P43003 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC1A3P43003 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A3P43003 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A3P43003 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC1A3P43003 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 LINC01126-201ENST00000623515 1646 ntBASIC16.61■□□□□ 0.25
SLC1A3P43003 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SLC1A3P43003 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC1A3P43003 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC1A3P43003 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC1A3P43003 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms