Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 CCR12P-201ENST00000446203 998 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNNA1P35221 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.09■□□□□ 0.65
CTNNA1P35221 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.09■□□□□ 0.65
CTNNA1P35221 AC104390.1-201ENST00000555663 520 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 FITM1-202ENST00000559294 800 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 AC009065.1-201ENST00000564055 1225 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 MIR3180-4-201ENST00000582223 153 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 AP000525.1-201ENST00000608286 694 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTNNA1P35221 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 KRT18P55-202ENST00000578578 1546 ntBASIC19.09■□□□□ 0.65
CTNNA1P35221 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNNA1P35221 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.08■□□□□ 0.65
CTNNA1P35221 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNNA1P35221 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.08■□□□□ 0.64
CTNNA1P35221 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.08■□□□□ 0.64
CTNNA1P35221 AC007663.1-201ENST00000438948 1240 ntBASIC19.08■□□□□ 0.64
CTNNA1P35221 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.08■□□□□ 0.64
CTNNA1P35221 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.08■□□□□ 0.64
CTNNA1P35221 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.08■□□□□ 0.64
CTNNA1P35221 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.08■□□□□ 0.64
CTNNA1P35221 BX088651.1-201ENST00000540551 451 ntBASIC19.08■□□□□ 0.64
CTNNA1P35221 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNNA1P35221 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.08■□□□□ 0.64
CTNNA1P35221 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.08■□□□□ 0.64
CTNNA1P35221 AC112497.1-201ENST00000624824 639 ntBASIC19.08■□□□□ 0.64
CTNNA1P35221 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNNA1P35221 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.08■□□□□ 0.64
CTNNA1P35221 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNNA1P35221 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNNA1P35221 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTNNA1P35221 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTNNA1P35221 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.07■□□□□ 0.64
CTNNA1P35221 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.07■□□□□ 0.64
CTNNA1P35221 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.07■□□□□ 0.64
CTNNA1P35221 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.07■□□□□ 0.64
CTNNA1P35221 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.07■□□□□ 0.64
CTNNA1P35221 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.07■□□□□ 0.64
CTNNA1P35221 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.07■□□□□ 0.64
CTNNA1P35221 AC080080.1-201ENST00000625121 2420 ntBASIC19.07■□□□□ 0.64
CTNNA1P35221 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNNA1P35221 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CTNNA1P35221 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNNA1P35221 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNNA1P35221 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTNNA1P35221 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNNA1P35221 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNNA1P35221 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms