Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
HOXC8P31273 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.61■□□□□ 0.73
HOXC8P31273 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
HOXC8P31273 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXC8P31273 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
HOXC8P31273 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HOXC8P31273 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC8P31273 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC8P31273 AL049757.1-201ENST00000616842 1596 ntBASIC19.61■□□□□ 0.73
HOXC8P31273 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC8P31273 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC8P31273 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HOXC8P31273 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC8P31273 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HOXC8P31273 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC8P31273 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.6■□□□□ 0.73
HOXC8P31273 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.6■□□□□ 0.73
HOXC8P31273 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.6■□□□□ 0.73
HOXC8P31273 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.6■□□□□ 0.73
HOXC8P31273 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.6■□□□□ 0.73
HOXC8P31273 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.6■□□□□ 0.73
HOXC8P31273 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HOXC8P31273 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC8P31273 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXC8P31273 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HOXC8P31273 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXC8P31273 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXC8P31273 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXC8P31273 KRT18P3-201ENST00000451602 1288 ntBASIC19.59■□□□□ 0.73
HOXC8P31273 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXC8P31273 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.59■□□□□ 0.73
HOXC8P31273 AC006557.2-201ENST00000592985 1240 ntBASIC19.59■□□□□ 0.73
HOXC8P31273 AC004817.3-201ENST00000602957 2129 ntBASIC19.59■□□□□ 0.73
HOXC8P31273 AC073592.5-201ENST00000624854 528 ntBASIC19.59■□□□□ 0.73
HOXC8P31273 SLC25A24-204ENST00000569674 2357 ntBASIC19.59■□□□□ 0.73
HOXC8P31273 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.59■□□□□ 0.73
HOXC8P31273 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXC8P31273 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
HOXC8P31273 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXC8P31273 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
HOXC8P31273 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.58■□□□□ 0.73
HOXC8P31273 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC8P31273 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HOXC8P31273 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC8P31273 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC8P31273 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC8P31273 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC8P31273 AL139424.1-201ENST00000607572 797 ntBASIC19.58■□□□□ 0.72
HOXC8P31273 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.58■□□□□ 0.72
HOXC8P31273 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC8P31273 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC8P31273 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC8P31273 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC8P31273 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC8P31273 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC8P31273 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.57■□□□□ 0.72
HOXC8P31273 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.57■□□□□ 0.72
HOXC8P31273 AC005104.2-201ENST00000427818 678 ntBASIC19.57■□□□□ 0.72
HOXC8P31273 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
HOXC8P31273 AC092183.1-201ENST00000469884 875 ntBASIC19.57■□□□□ 0.72
HOXC8P31273 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.57■□□□□ 0.72
HOXC8P31273 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC8P31273 AL589182.2-201ENST00000619332 1049 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms