Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.82■□□□□ 0.28
NR4A1P22736 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.82■□□□□ 0.28
NR4A1P22736 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.82■□□□□ 0.28
NR4A1P22736 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.82■□□□□ 0.28
NR4A1P22736 CD177P1-201ENST00000606252 935 ntBASIC16.82■□□□□ 0.28
NR4A1P22736 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.82■□□□□ 0.28
NR4A1P22736 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NR4A1P22736 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NR4A1P22736 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.82■□□□□ 0.28
NR4A1P22736 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 AC093677.2-201ENST00000600169 1863 ntBASIC16.82■□□□□ 0.28
NR4A1P22736 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.81■□□□□ 0.28
NR4A1P22736 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.81■□□□□ 0.28
NR4A1P22736 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NR4A1P22736 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.81■□□□□ 0.28
NR4A1P22736 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.81■□□□□ 0.28
NR4A1P22736 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.81■□□□□ 0.28
NR4A1P22736 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.81■□□□□ 0.28
NR4A1P22736 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.81■□□□□ 0.28
NR4A1P22736 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.81■□□□□ 0.28
NR4A1P22736 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NR4A1P22736 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NR4A1P22736 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.81■□□□□ 0.28
NR4A1P22736 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR4A1P22736 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.8■□□□□ 0.28
NR4A1P22736 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NR4A1P22736 AL596257.1-201ENST00000641463 2694 ntBASIC16.8■□□□□ 0.28
NR4A1P22736 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 KRT17P2-201ENST00000300992 1314 ntBASIC16.8■□□□□ 0.28
NR4A1P22736 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NR4A1P22736 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.8■□□□□ 0.28
NR4A1P22736 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
NR4A1P22736 FAM197Y1-201ENST00000421178 764 ntBASIC16.8■□□□□ 0.28
NR4A1P22736 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.8■□□□□ 0.28
NR4A1P22736 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.8■□□□□ 0.28
NR4A1P22736 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.8■□□□□ 0.28
NR4A1P22736 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.8■□□□□ 0.28
NR4A1P22736 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NR4A1P22736 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
NR4A1P22736 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
NR4A1P22736 AL118508.1-201ENST00000613502 2345 ntBASIC16.8■□□□□ 0.28
NR4A1P22736 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.8■□□□□ 0.28
NR4A1P22736 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
NR4A1P22736 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR4A1P22736 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NR4A1P22736 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
NR4A1P22736 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NR4A1P22736 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 AL513477.1-201ENST00000602865 2407 ntBASIC16.79■□□□□ 0.28
NR4A1P22736 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.79■□□□□ 0.28
NR4A1P22736 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.79■□□□□ 0.28
NR4A1P22736 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR4A1P22736 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms