Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.2■□□□□ 0.98
TOP1P11387 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.2■□□□□ 0.98
TOP1P11387 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TOP1P11387 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.2■□□□□ 0.98
TOP1P11387 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TOP1P11387 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TOP1P11387 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TOP1P11387 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TOP1P11387 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TOP1P11387 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TOP1P11387 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 AP000867.3-201ENST00000524675 377 ntBASIC21.19■□□□□ 0.98
TOP1P11387 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TOP1P11387 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TOP1P11387 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TOP1P11387 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TOP1P11387 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 AC233702.3-201ENST00000578656 1387 ntBASIC21.19■□□□□ 0.98
TOP1P11387 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 AC018470.1-201ENST00000624790 3129 ntBASIC21.19■□□□□ 0.98
TOP1P11387 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.19■□□□□ 0.98
TOP1P11387 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.18■□□□□ 0.98
TOP1P11387 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TOP1P11387 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.18■□□□□ 0.98
TOP1P11387 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 AC005332.8-201ENST00000622750 2735 ntBASIC21.18■□□□□ 0.98
TOP1P11387 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.18■□□□□ 0.98
TOP1P11387 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TOP1P11387 AL845331.1-201ENST00000424978 1190 ntBASIC21.18■□□□□ 0.98
TOP1P11387 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.18■□□□□ 0.98
TOP1P11387 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.18■□□□□ 0.98
TOP1P11387 AL353801.3-201ENST00000609898 542 ntBASIC21.18■□□□□ 0.98
TOP1P11387 AC009154.2-201ENST00000621177 724 ntBASIC21.18■□□□□ 0.98
TOP1P11387 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TOP1P11387 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.18■□□□□ 0.98
TOP1P11387 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
TOP1P11387 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
TOP1P11387 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TOP1P11387 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TOP1P11387 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.17■□□□□ 0.98
TOP1P11387 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 AC012615.1-201ENST00000565797 1299 ntBASIC21.17■□□□□ 0.98
TOP1P11387 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 AC012313.10-201ENST00000623509 926 ntBASIC21.17■□□□□ 0.98
TOP1P11387 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.17■□□□□ 0.98
TOP1P11387 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.17■□□□□ 0.98
TOP1P11387 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.17■□□□□ 0.98
TOP1P11387 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.17■□□□□ 0.98
TOP1P11387 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.17■□□□□ 0.98
TOP1P11387 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOP1P11387 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TOP1P11387 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.16■□□□□ 0.98
TOP1P11387 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TOP1P11387 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TOP1P11387 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms