Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC011298.2-201ENST00000617989 482 ntBASIC15.2■□□□□ 0.02
CD74P04233 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.2■□□□□ 0.02
CD74P04233 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CD74P04233 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.2■□□□□ 0.02
CD74P04233 HLA-J-201ENST00000462773 1622 ntBASIC15.2■□□□□ 0.02
CD74P04233 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.2■□□□□ 0.02
CD74P04233 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CD74P04233 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD74P04233 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 AC036111.1-201ENST00000533973 1582 ntBASIC15.19■□□□□ 0.02
CD74P04233 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 AC008894.3-201ENST00000624324 3103 ntBASIC15.19■□□□□ 0.02
CD74P04233 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.19■□□□□ 0.02
CD74P04233 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CD74P04233 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.19■□□□□ 0.02
CD74P04233 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CD74P04233 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.19■□□□□ 0.02
CD74P04233 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 NCF1B-203ENST00000435988 1254 ntBASIC15.19■□□□□ 0.02
CD74P04233 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.19■□□□□ 0.02
CD74P04233 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CD74P04233 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
CD74P04233 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CD74P04233 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.19■□□□□ 0.02
CD74P04233 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 AGGF1P2-201ENST00000426656 2106 ntBASIC15.19■□□□□ 0.02
CD74P04233 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.19■□□□□ 0.02
CD74P04233 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD74P04233 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.18■□□□□ 0.02
CD74P04233 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CD74P04233 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD74P04233 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.18■□□□□ 0.02
CD74P04233 UNC93B5-201ENST00000530315 699 ntBASIC15.18■□□□□ 0.02
CD74P04233 AL138781.1-201ENST00000566567 1274 ntBASIC15.18■□□□□ 0.02
CD74P04233 AC026271.3-201ENST00000571884 352 ntBASIC15.18■□□□□ 0.02
CD74P04233 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.18■□□□□ 0.02
CD74P04233 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.18■□□□□ 0.02
CD74P04233 AC008403.3-201ENST00000598924 454 ntBASIC15.18■□□□□ 0.02
CD74P04233 AL353708.3-201ENST00000610272 989 ntBASIC15.18■□□□□ 0.02
CD74P04233 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.18■□□□□ 0.02
CD74P04233 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.18■□□□□ 0.02
CD74P04233 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.18■□□□□ 0.02
CD74P04233 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.18■□□□□ 0.02
CD74P04233 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.18■□□□□ 0.02
CD74P04233 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CD74P04233 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD74P04233 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CD74P04233 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.17■□□□□ 0.02
CD74P04233 AC105020.1-201ENST00000435356 2205 ntBASIC15.17■□□□□ 0.02
CD74P04233 AC106886.4-201ENST00000623557 2502 ntBASIC15.17■□□□□ 0.02
CD74P04233 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD74P04233 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms