Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.23■□□□□ 0.83
GGPS1O95749 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.23■□□□□ 0.83
GGPS1O95749 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.23■□□□□ 0.83
GGPS1O95749 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.23■□□□□ 0.83
GGPS1O95749 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.23■□□□□ 0.83
GGPS1O95749 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.23■□□□□ 0.83
GGPS1O95749 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.23■□□□□ 0.83
GGPS1O95749 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.23■□□□□ 0.83
GGPS1O95749 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.23■□□□□ 0.83
GGPS1O95749 AC008608.2-201ENST00000606089 416 ntBASIC20.23■□□□□ 0.83
GGPS1O95749 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.23■□□□□ 0.83
GGPS1O95749 INTS4P1-201ENST00000438455 1935 ntBASIC20.23■□□□□ 0.83
GGPS1O95749 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.23■□□□□ 0.83
GGPS1O95749 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.23■□□□□ 0.83
GGPS1O95749 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.23■□□□□ 0.83
GGPS1O95749 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GGPS1O95749 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GGPS1O95749 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GGPS1O95749 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.22■□□□□ 0.83
GGPS1O95749 FAM197Y8-203ENST00000450145 560 ntBASIC20.22■□□□□ 0.83
GGPS1O95749 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GGPS1O95749 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.22■□□□□ 0.83
GGPS1O95749 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.22■□□□□ 0.83
GGPS1O95749 AC011467.2-201ENST00000598425 242 ntBASIC20.22■□□□□ 0.83
GGPS1O95749 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GGPS1O95749 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GGPS1O95749 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
GGPS1O95749 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.21■□□□□ 0.83
GGPS1O95749 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
GGPS1O95749 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.21■□□□□ 0.83
GGPS1O95749 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.21■□□□□ 0.83
GGPS1O95749 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.21■□□□□ 0.83
GGPS1O95749 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.21■□□□□ 0.83
GGPS1O95749 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.21■□□□□ 0.83
GGPS1O95749 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.21■□□□□ 0.83
GGPS1O95749 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.21■□□□□ 0.83
GGPS1O95749 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
GGPS1O95749 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GGPS1O95749 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.21■□□□□ 0.83
GGPS1O95749 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
GGPS1O95749 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GGPS1O95749 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms