Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
USP1O94782 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP1O94782 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.3■□□□□ 0.52
USP1O94782 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.3■□□□□ 0.52
USP1O94782 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.3■□□□□ 0.52
USP1O94782 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP1O94782 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.3■□□□□ 0.52
USP1O94782 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.29■□□□□ 0.52
USP1O94782 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 KRT18P55-202ENST00000578578 1546 ntBASIC18.29■□□□□ 0.52
USP1O94782 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP1O94782 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 AC009947.2-201ENST00000444014 672 ntBASIC18.29■□□□□ 0.52
USP1O94782 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.29■□□□□ 0.52
USP1O94782 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.29■□□□□ 0.52
USP1O94782 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
USP1O94782 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
USP1O94782 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP1O94782 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP1O94782 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.29■□□□□ 0.52
USP1O94782 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.29■□□□□ 0.52
USP1O94782 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP1O94782 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.28■□□□□ 0.52
USP1O94782 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
USP1O94782 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP1O94782 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.28■□□□□ 0.52
USP1O94782 HMGA1P5-201ENST00000412453 271 ntBASIC18.28■□□□□ 0.52
USP1O94782 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.28■□□□□ 0.52
USP1O94782 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.28■□□□□ 0.52
USP1O94782 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.28■□□□□ 0.52
USP1O94782 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.28■□□□□ 0.52
USP1O94782 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
USP1O94782 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.28■□□□□ 0.52
USP1O94782 NEK4P2-201ENST00000580004 1012 ntBASIC18.28■□□□□ 0.52
USP1O94782 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 FAM87A-204ENST00000613235 858 ntBASIC18.28■□□□□ 0.52
USP1O94782 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.28■□□□□ 0.52
USP1O94782 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP1O94782 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
USP1O94782 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP1O94782 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP1O94782 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USP1O94782 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
USP1O94782 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 PRORSD1P-202ENST00000563365 2154 ntBASIC18.27■□□□□ 0.52
USP1O94782 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP1O94782 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP1O94782 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.27■□□□□ 0.52
USP1O94782 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
USP1O94782 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms