Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CTNND1O60716 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.04■□□□□ 0.96
CTNND1O60716 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.04■□□□□ 0.96
CTNND1O60716 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTNND1O60716 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.04■□□□□ 0.96
CTNND1O60716 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.03■□□□□ 0.96
CTNND1O60716 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTNND1O60716 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 AC132938.6-201ENST00000623828 1655 ntBASIC21.03■□□□□ 0.96
CTNND1O60716 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.03■□□□□ 0.96
CTNND1O60716 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.03■□□□□ 0.96
CTNND1O60716 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.03■□□□□ 0.96
CTNND1O60716 AC007967.3-201ENST00000434308 558 ntBASIC21.03■□□□□ 0.96
CTNND1O60716 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.03■□□□□ 0.96
CTNND1O60716 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.03■□□□□ 0.96
CTNND1O60716 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CTNND1O60716 AC107918.4-202ENST00000641623 219 ntBASIC21.03■□□□□ 0.96
CTNND1O60716 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTNND1O60716 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.03■□□□□ 0.96
CTNND1O60716 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.03■□□□□ 0.96
CTNND1O60716 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CTNND1O60716 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CTNND1O60716 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.02■□□□□ 0.96
CTNND1O60716 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.02■□□□□ 0.96
CTNND1O60716 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.02■□□□□ 0.96
CTNND1O60716 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.02■□□□□ 0.96
CTNND1O60716 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CTNND1O60716 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTNND1O60716 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CTNND1O60716 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.02■□□□□ 0.95
CTNND1O60716 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CTNND1O60716 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.02■□□□□ 0.95
CTNND1O60716 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.01■□□□□ 0.95
CTNND1O60716 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.01■□□□□ 0.95
CTNND1O60716 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CTNND1O60716 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CTNND1O60716 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
CTNND1O60716 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTNND1O60716 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 AL591424.1-201ENST00000442569 1213 ntBASIC21.01■□□□□ 0.95
CTNND1O60716 RNA5SP415-201ENST00000517246 115 ntBASIC21.01■□□□□ 0.95
CTNND1O60716 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.01■□□□□ 0.95
CTNND1O60716 AC105339.3-201ENST00000560043 636 ntBASIC21.01■□□□□ 0.95
CTNND1O60716 Z83851.2-201ENST00000609564 659 ntBASIC21.01■□□□□ 0.95
CTNND1O60716 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTNND1O60716 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CTNND1O60716 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTNND1O60716 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.01■□□□□ 0.95
CTNND1O60716 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CTNND1O60716 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CTNND1O60716 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 AC096633.1-201ENST00000422446 749 ntBASIC21■□□□□ 0.95
CTNND1O60716 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21■□□□□ 0.95
CTNND1O60716 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CTNND1O60716 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21■□□□□ 0.95
CTNND1O60716 AC140113.2-201ENST00000604370 208 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms