Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX4O60224 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX4O60224 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSX4O60224 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SSX4O60224 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.42■□□□□ 0.22
SSX4O60224 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 INGX-201ENST00000359239 846 ntBASIC16.42■□□□□ 0.22
SSX4O60224 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SSX4O60224 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.42■□□□□ 0.22
SSX4O60224 FAM207BP-201ENST00000447172 505 ntBASIC16.42■□□□□ 0.22
SSX4O60224 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SSX4O60224 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SSX4O60224 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX4O60224 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SSX4O60224 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX4O60224 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.42■□□□□ 0.22
SSX4O60224 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX4O60224 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.42■□□□□ 0.22
SSX4O60224 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSX4O60224 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX4O60224 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX4O60224 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSX4O60224 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.41■□□□□ 0.22
SSX4O60224 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSX4O60224 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX4O60224 WWOX-216ENST00000569818 525 ntBASIC16.41■□□□□ 0.22
SSX4O60224 AC006011.2-201ENST00000621313 1158 ntBASIC16.41■□□□□ 0.22
SSX4O60224 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.41■□□□□ 0.22
SSX4O60224 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX4O60224 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
SSX4O60224 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX4O60224 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.4■□□□□ 0.22
SSX4O60224 HTR7P1-202ENST00000624664 4411 ntBASIC16.4■□□□□ 0.22
SSX4O60224 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.4■□□□□ 0.22
SSX4O60224 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.4■□□□□ 0.22
SSX4O60224 AK4P3-201ENST00000418260 669 ntBASIC16.4■□□□□ 0.22
SSX4O60224 MFAP1P1-201ENST00000442257 1255 ntBASIC16.4■□□□□ 0.22
SSX4O60224 AC116562.4-202ENST00000641738 218 ntBASIC16.4■□□□□ 0.22
SSX4O60224 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
SSX4O60224 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.4■□□□□ 0.22
SSX4O60224 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 AL162727.3-201ENST00000635661 2787 ntBASIC16.4■□□□□ 0.22
SSX4O60224 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.4■□□□□ 0.22
SSX4O60224 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX4O60224 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SSX4O60224 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SSX4O60224 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.39■□□□□ 0.21
SSX4O60224 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX4O60224 ZNF815P-204ENST00000434898 1737 ntBASIC16.39■□□□□ 0.21
SSX4O60224 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX4O60224 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.39■□□□□ 0.21
SSX4O60224 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.39■□□□□ 0.21
SSX4O60224 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
SSX4O60224 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SSX4O60224 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms