Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE3O43900 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE3O43900 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.33■□□□□ 0.36
PRICKLE3O43900 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRICKLE3O43900 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 AC233702.3-201ENST00000578656 1387 ntBASIC17.32■□□□□ 0.36
PRICKLE3O43900 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 AC246785.2-201ENST00000432512 513 ntBASIC17.32■□□□□ 0.36
PRICKLE3O43900 TPM4P1-201ENST00000436100 807 ntBASIC17.32■□□□□ 0.36
PRICKLE3O43900 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 AP005901.3-202ENST00000581653 237 ntBASIC17.32■□□□□ 0.36
PRICKLE3O43900 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 AC138028.4-201ENST00000564984 1845 ntBASIC17.32■□□□□ 0.36
PRICKLE3O43900 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 AP000997.3-201ENST00000623333 2250 ntBASIC17.32■□□□□ 0.36
PRICKLE3O43900 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PRICKLE3O43900 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRICKLE3O43900 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRICKLE3O43900 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRICKLE3O43900 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 AC022898.2-201ENST00000616822 1312 ntBASIC17.3■□□□□ 0.36
PRICKLE3O43900 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 TOB2P1-201ENST00000469761 992 ntBASIC17.3■□□□□ 0.36
PRICKLE3O43900 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRICKLE3O43900 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 AC011840.4-201ENST00000578471 627 ntBASIC17.3■□□□□ 0.36
PRICKLE3O43900 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PRICKLE3O43900 AC005336.2-201ENST00000593183 939 ntBASIC17.3■□□□□ 0.36
PRICKLE3O43900 AL121894.2-201ENST00000602977 491 ntBASIC17.3■□□□□ 0.36
PRICKLE3O43900 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms