Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AC096734.2-201ENST00000562054 433 ntBASIC21.69■■□□□ 1.06
NFKBIEO00221 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.69■■□□□ 1.06
NFKBIEO00221 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NFKBIEO00221 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NFKBIEO00221 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NFKBIEO00221 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NFKBIEO00221 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NFKBIEO00221 AL049812.1-201ENST00000432563 2267 ntBASIC21.68■■□□□ 1.06
NFKBIEO00221 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.68■■□□□ 1.06
NFKBIEO00221 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.68■■□□□ 1.06
NFKBIEO00221 AC109322.1-201ENST00000524499 1264 ntBASIC21.68■■□□□ 1.06
NFKBIEO00221 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.68■■□□□ 1.06
NFKBIEO00221 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.68■■□□□ 1.06
NFKBIEO00221 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.68■■□□□ 1.06
NFKBIEO00221 OR7E47P-204ENST00000575924 449 ntBASIC21.68■■□□□ 1.06
NFKBIEO00221 AC004835.2-201ENST00000603762 682 ntBASIC21.68■■□□□ 1.06
NFKBIEO00221 AC091812.2-201ENST00000619081 385 ntBASIC21.68■■□□□ 1.06
NFKBIEO00221 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.68■■□□□ 1.06
NFKBIEO00221 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NFKBIEO00221 AL161938.1-201ENST00000569833 2180 ntBASIC21.68■■□□□ 1.06
NFKBIEO00221 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKBIEO00221 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.68■■□□□ 1.06
NFKBIEO00221 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NFKBIEO00221 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 NCF1C-201ENST00000438382 1427 ntBASIC21.67■■□□□ 1.06
NFKBIEO00221 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.67■■□□□ 1.06
NFKBIEO00221 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NFKBIEO00221 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.67■■□□□ 1.06
NFKBIEO00221 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.67■■□□□ 1.06
NFKBIEO00221 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.67■■□□□ 1.06
NFKBIEO00221 RHOQP3-201ENST00000437982 621 ntBASIC21.67■■□□□ 1.06
NFKBIEO00221 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.67■■□□□ 1.06
NFKBIEO00221 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.67■■□□□ 1.06
NFKBIEO00221 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.67■■□□□ 1.06
NFKBIEO00221 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.67■■□□□ 1.06
NFKBIEO00221 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NFKBIEO00221 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NFKBIEO00221 AC132938.5-201ENST00000624980 1813 ntBASIC21.66■■□□□ 1.06
NFKBIEO00221 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKBIEO00221 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NFKBIEO00221 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NFKBIEO00221 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
NFKBIEO00221 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
NFKBIEO00221 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
NFKBIEO00221 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.66■■□□□ 1.06
NFKBIEO00221 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.66■■□□□ 1.06
NFKBIEO00221 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.66■■□□□ 1.06
NFKBIEO00221 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.66■■□□□ 1.06
NFKBIEO00221 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NFKBIEO00221 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
NFKBIEO00221 AC105339.1-204ENST00000636249 355 ntBASIC21.66■■□□□ 1.06
NFKBIEO00221 AC092902.6-201ENST00000641783 218 ntBASIC21.66■■□□□ 1.06
NFKBIEO00221 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NFKBIEO00221 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKBIEO00221 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKBIEO00221 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKBIEO00221 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.65■■□□□ 1.06
NFKBIEO00221 AC025580.3-201ENST00000617932 1424 ntBASIC21.65■■□□□ 1.06
NFKBIEO00221 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.65■■□□□ 1.06
NFKBIEO00221 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKBIEO00221 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKBIEO00221 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NFKBIEO00221 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKBIEO00221 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKBIEO00221 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKBIEO00221 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.65■■□□□ 1.06
NFKBIEO00221 AC103564.2-201ENST00000432853 1299 ntBASIC21.65■■□□□ 1.06
NFKBIEO00221 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
NFKBIEO00221 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.65■■□□□ 1.06
NFKBIEO00221 AL390955.2-201ENST00000603032 514 ntBASIC21.65■■□□□ 1.06
NFKBIEO00221 AF228730.6-201ENST00000641497 218 ntBASIC21.65■■□□□ 1.06
NFKBIEO00221 AC084121.3-201ENST00000641716 218 ntBASIC21.65■■□□□ 1.06
NFKBIEO00221 AC105233.6-201ENST00000642093 218 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms