Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 AC132938.6-201ENST00000623828 1655 ntBASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.17■□□□□ 0.18
TRGV5A0A0B4J1U4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 PHGDH-209ENST00000641074 1780 ntBASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 AL662844.1-201ENST00000546340 181 ntBASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 AC011467.2-201ENST00000598425 242 ntBASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV5A0A0B4J1U4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 AC064862.7-201ENST00000604520 867 ntBASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 INTS4P1-201ENST00000438455 1935 ntBASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 AC093010.1-201ENST00000473625 1624 ntBASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 WIZP1-201ENST00000531444 2299 ntBASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRGV5A0A0B4J1U4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV5A0A0B4J1U4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms