Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4B1Q9Y6B7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP4B1Q9Y6B7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
AP4B1Q9Y6B7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP4B1Q9Y6B7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP4B1Q9Y6B7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 UNC93B2-201ENST00000285383 730 ntBASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 AC004951.3-201ENST00000418645 1148 ntBASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 AL355075.4-201ENST00000554988 638 ntBASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 RCC2P6-201ENST00000526625 1557 ntBASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4B1Q9Y6B7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 AP001094.4-201ENST00000579008 2176 ntBASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 Z85996.1-201ENST00000494644 937 ntBASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 DGCR10-201ENST00000609839 495 ntBASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 AC130371.2-201ENST00000619443 611 ntBASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 HEIH-201ENST00000623091 1652 ntBASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms