Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC018695.7-201ENST00000624587 2492 ntBASIC17.14■□□□□ 0.34
GPC6Q9Y625 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 CCR12P-201ENST00000446203 998 ntBASIC17.14■□□□□ 0.33
GPC6Q9Y625 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GPC6Q9Y625 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC6Q9Y625 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 KRT8P50-201ENST00000562022 1438 ntBASIC17.13■□□□□ 0.33
GPC6Q9Y625 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 NAPSB-206ENST00000562112 1266 ntBASIC17.13■□□□□ 0.33
GPC6Q9Y625 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GPC6Q9Y625 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC6Q9Y625 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 AL162727.3-201ENST00000635661 2787 ntBASIC17.12■□□□□ 0.33
GPC6Q9Y625 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 TSPY17P-201ENST00000450329 467 ntBASIC17.12■□□□□ 0.33
GPC6Q9Y625 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 AC138028.4-201ENST00000564984 1845 ntBASIC17.12■□□□□ 0.33
GPC6Q9Y625 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms