Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 UNC93B6-202ENST00000528242 690 ntBASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 NKAPP1-205ENST00000585790 367 ntBASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 MTDHP4-201ENST00000600287 670 ntBASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 AC125437.2-201ENST00000625180 2167 ntBASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGA1Q9Y5H4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 AC087289.5-201ENST00000586076 3175 ntBASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 MYLKP1-201ENST00000509077 1580 ntBASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGA1Q9Y5H4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA1Q9Y5H4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 AC027796.2-201ENST00000575326 344 ntBASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 MTDHP5-201ENST00000598980 586 ntBASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 PGM5P2-202ENST00000637225 1043 ntBASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 AP000867.4-201ENST00000641616 219 ntBASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA1Q9Y5H4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA1Q9Y5H4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms