Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 PHGDH-209ENST00000641074 1780 ntBASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB1Q9Y5F3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 AC099343.3-201ENST00000605834 2503 ntBASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 AL024508.2-201ENST00000607749 1894 ntBASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB1Q9Y5F3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 KRT17P6-201ENST00000453795 1220 ntBASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB1Q9Y5F3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 LINC01126-201ENST00000623515 1646 ntBASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 AL096828.2-201ENST00000567259 1965 ntBASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB1Q9Y5F3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms