Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 AL121832.2-201ENST00000610979 668 ntBASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERGIC3Q9Y282 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 HLA-B-256ENST00000639848 1089 ntBASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 AC068418.2-201ENST00000577309 3703 ntBASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERGIC3Q9Y282 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERGIC3Q9Y282 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
ERGIC3Q9Y282 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERGIC3Q9Y282 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERGIC3Q9Y282 GMCL1P1-201ENST00000463439 1581 ntBASIC16.51■□□□□ 0.23
ERGIC3Q9Y282 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERGIC3Q9Y282 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERGIC3Q9Y282 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERGIC3Q9Y282 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERGIC3Q9Y282 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms