Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AL645608.8-201ENST00000606034 2086 ntBASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 SLC25A1P2-201ENST00000430693 912 ntBASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 TSPY17P-201ENST00000450329 467 ntBASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 KRT18P55-202ENST00000578578 1546 ntBASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2BQ9UQN3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 UNC93B2-201ENST00000285383 730 ntBASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 AL390955.1-201ENST00000428694 934 ntBASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP2BQ9UQN3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 AC099398.1-201ENST00000567919 2776 ntBASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 AP000525.1-201ENST00000608286 694 ntBASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 AC112497.1-201ENST00000624824 639 ntBASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHMP2BQ9UQN3 AC092338.2-201ENST00000568827 1415 ntBASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2BQ9UQN3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP2BQ9UQN3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP2BQ9UQN3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CHMP2BQ9UQN3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms