Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 CICP6-201ENST00000457191 2729 ntBASIC16.09■□□□□ 0.17
NLKQ9UBE8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 MIR718-201ENST00000390190 70 ntBASIC16.09■□□□□ 0.17
NLKQ9UBE8 FAM197Y1-201ENST00000421178 764 ntBASIC16.09■□□□□ 0.17
NLKQ9UBE8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 AC233702.5-201ENST00000584107 538 ntBASIC16.09■□□□□ 0.17
NLKQ9UBE8 CD177P1-201ENST00000606252 935 ntBASIC16.09■□□□□ 0.17
NLKQ9UBE8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 AP006294.2-201ENST00000641667 209 ntBASIC16.09■□□□□ 0.17
NLKQ9UBE8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 KRT8P41-201ENST00000533985 1514 ntBASIC16.09■□□□□ 0.17
NLKQ9UBE8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.09■□□□□ 0.17
NLKQ9UBE8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NLKQ9UBE8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.08■□□□□ 0.17
NLKQ9UBE8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
NLKQ9UBE8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.08■□□□□ 0.17
NLKQ9UBE8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
NLKQ9UBE8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.08■□□□□ 0.17
NLKQ9UBE8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.08■□□□□ 0.16
NLKQ9UBE8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NLKQ9UBE8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NLKQ9UBE8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.08■□□□□ 0.16
NLKQ9UBE8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 AC004951.3-201ENST00000418645 1148 ntBASIC16.07■□□□□ 0.16
NLKQ9UBE8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 AC008550.1-201ENST00000511500 884 ntBASIC16.07■□□□□ 0.16
NLKQ9UBE8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 AL049637.2-201ENST00000641778 930 ntBASIC16.07■□□□□ 0.16
NLKQ9UBE8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NLKQ9UBE8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NLKQ9UBE8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms