Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 ATP5G2P1-201ENST00000433580 426 ntBASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP13A3Q9H7F0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 AC093010.1-201ENST00000473625 1624 ntBASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.27■□□□□ 0.51
ATP13A3Q9H7F0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 KRT18P1-202ENST00000452408 1331 ntBASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 NPAP1P7-201ENST00000613027 823 ntBASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 AC009154.2-201ENST00000621177 724 ntBASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ATP13A3Q9H7F0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 AL096828.2-201ENST00000567259 1965 ntBASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 KRT18P65-201ENST00000439811 1286 ntBASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 AP002414.4-201ENST00000589764 1148 ntBASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 AL592071.1-201ENST00000611956 408 ntBASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 AC124864.1-201ENST00000623408 392 ntBASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP13A3Q9H7F0 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 AP002383.4-201ENST00000442518 975 ntBASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 AC092119.3-201ENST00000612618 583 ntBASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
ATP13A3Q9H7F0 LTB4R2-202ENST00000528054 3092 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms