Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
NXF3Q9H4D5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 INTS4P1-201ENST00000438455 1935 ntBASIC19.47■□□□□ 0.71
NXF3Q9H4D5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 AL096828.2-201ENST00000567259 1965 ntBASIC19.47■□□□□ 0.71
NXF3Q9H4D5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.47■□□□□ 0.71
NXF3Q9H4D5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 AC135776.1-201ENST00000319817 2481 ntBASIC19.46■□□□□ 0.71
NXF3Q9H4D5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 AC093677.2-201ENST00000600169 1863 ntBASIC19.46■□□□□ 0.71
NXF3Q9H4D5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 AL138781.2-201ENST00000617896 1843 ntBASIC19.46■□□□□ 0.71
NXF3Q9H4D5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.46■□□□□ 0.71
NXF3Q9H4D5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 AC106795.1-205ENST00000512851 1056 ntBASIC19.45■□□□□ 0.7
NXF3Q9H4D5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 AC008608.2-201ENST00000606089 416 ntBASIC19.45■□□□□ 0.7
NXF3Q9H4D5 AP001269.4-201ENST00000609611 512 ntBASIC19.45■□□□□ 0.7
NXF3Q9H4D5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NXF3Q9H4D5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms