Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AC011840.4-201ENST00000578471 627 ntBASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM62Q9BVG3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 KRT18P1-202ENST00000452408 1331 ntBASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 DRAXINP1-201ENST00000437611 948 ntBASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 AC124864.1-201ENST00000623408 392 ntBASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM62Q9BVG3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 MTCL1P1-201ENST00000446207 792 ntBASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 AC068472.1-201ENST00000474589 881 ntBASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 AC116407.2-201ENST00000613639 860 ntBASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM62Q9BVG3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 HTR7P1-202ENST00000624664 4411 ntBASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM62Q9BVG3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms