Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21■□□□□ 0.95
SLF1Q9BQI6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21■□□□□ 0.95
SLF1Q9BQI6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21■□□□□ 0.95
SLF1Q9BQI6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21■□□□□ 0.95
SLF1Q9BQI6 SAPCD2P3-201ENST00000455031 850 ntBASIC21■□□□□ 0.95
SLF1Q9BQI6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21■□□□□ 0.95
SLF1Q9BQI6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SLF1Q9BQI6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21■□□□□ 0.95
SLF1Q9BQI6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21■□□□□ 0.95
SLF1Q9BQI6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
SLF1Q9BQI6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLF1Q9BQI6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 AC096582.2-201ENST00000510860 516 ntBASIC20.99■□□□□ 0.95
SLF1Q9BQI6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 AC009154.2-201ENST00000621177 724 ntBASIC20.99■□□□□ 0.95
SLF1Q9BQI6 LINC00602-201ENST00000629776 2065 ntBASIC20.99■□□□□ 0.95
SLF1Q9BQI6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLF1Q9BQI6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 AC005336.2-201ENST00000593183 939 ntBASIC20.98■□□□□ 0.95
SLF1Q9BQI6 AC114341.1-201ENST00000618070 349 ntBASIC20.98■□□□□ 0.95
SLF1Q9BQI6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 AC005082.1-201ENST00000413042 2259 ntBASIC20.98■□□□□ 0.95
SLF1Q9BQI6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLF1Q9BQI6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 AC106795.1-205ENST00000512851 1056 ntBASIC20.97■□□□□ 0.95
SLF1Q9BQI6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.97■□□□□ 0.95
SLF1Q9BQI6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms