Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.25■□□□□ 0.67
RAD9AQ99638 MIR3197-201ENST00000582241 73 ntBASIC19.25■□□□□ 0.67
RAD9AQ99638 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD9AQ99638 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD9AQ99638 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD9AQ99638 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD9AQ99638 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD9AQ99638 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAD9AQ99638 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAD9AQ99638 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.25■□□□□ 0.67
RAD9AQ99638 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAD9AQ99638 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.24■□□□□ 0.67
RAD9AQ99638 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.24■□□□□ 0.67
RAD9AQ99638 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RAD9AQ99638 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RAD9AQ99638 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.24■□□□□ 0.67
RAD9AQ99638 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.24■□□□□ 0.67
RAD9AQ99638 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RAD9AQ99638 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
RAD9AQ99638 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.24■□□□□ 0.67
RAD9AQ99638 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAD9AQ99638 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAD9AQ99638 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAD9AQ99638 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.23■□□□□ 0.67
RAD9AQ99638 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.23■□□□□ 0.67
RAD9AQ99638 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 CYMP-203ENST00000474680 1263 ntBASIC19.23■□□□□ 0.67
RAD9AQ99638 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.23■□□□□ 0.67
RAD9AQ99638 RFPL4AP1-201ENST00000530883 850 ntBASIC19.23■□□□□ 0.67
RAD9AQ99638 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAD9AQ99638 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.23■□□□□ 0.67
RAD9AQ99638 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 AL161938.1-201ENST00000569833 2180 ntBASIC19.23■□□□□ 0.67
RAD9AQ99638 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RAD9AQ99638 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAD9AQ99638 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.23■□□□□ 0.67
RAD9AQ99638 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAD9AQ99638 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
RAD9AQ99638 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 AC002310.6-201ENST00000624451 1377 ntBASIC19.22■□□□□ 0.67
RAD9AQ99638 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.22■□□□□ 0.67
RAD9AQ99638 AC254562.1-201ENST00000417586 456 ntBASIC19.22■□□□□ 0.67
RAD9AQ99638 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RAD9AQ99638 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAD9AQ99638 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.22■□□□□ 0.67
RAD9AQ99638 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
RAD9AQ99638 MIR4469-201ENST00000583919 79 ntBASIC19.22■□□□□ 0.67
RAD9AQ99638 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.22■□□□□ 0.67
RAD9AQ99638 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAD9AQ99638 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.22■□□□□ 0.67
RAD9AQ99638 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.22■□□□□ 0.67
RAD9AQ99638 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAD9AQ99638 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAD9AQ99638 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 AC004817.3-201ENST00000602957 2129 ntBASIC19.21■□□□□ 0.67
RAD9AQ99638 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RAD9AQ99638 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD9AQ99638 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RAD9AQ99638 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RAD9AQ99638 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms