Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 MIR564-202ENST00000385049 94 ntBASIC16.32■□□□□ 0.2
LRRC46Q96FV0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LRRC46Q96FV0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 PVRIG2P-201ENST00000435460 978 ntBASIC16.31■□□□□ 0.2
LRRC46Q96FV0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 AC012615.1-201ENST00000565797 1299 ntBASIC16.31■□□□□ 0.2
LRRC46Q96FV0 RN7SL510P-201ENST00000581311 263 ntBASIC16.31■□□□□ 0.2
LRRC46Q96FV0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC46Q96FV0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 DRAXINP1-201ENST00000437611 948 ntBASIC16.3■□□□□ 0.2
LRRC46Q96FV0 LINC00265-3P-201ENST00000447588 903 ntBASIC16.3■□□□□ 0.2
LRRC46Q96FV0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 AC104819.1-201ENST00000504587 486 ntBASIC16.3■□□□□ 0.2
LRRC46Q96FV0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 AP000867.3-201ENST00000524675 377 ntBASIC16.3■□□□□ 0.2
LRRC46Q96FV0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 IGHV3-41-201ENST00000613121 348 ntBASIC16.3■□□□□ 0.2
LRRC46Q96FV0 AC079602.3-201ENST00000623931 403 ntBASIC16.3■□□□□ 0.2
LRRC46Q96FV0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 FEM1AP3-201ENST00000403722 1741 ntBASIC16.3■□□□□ 0.2
LRRC46Q96FV0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC46Q96FV0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRRC46Q96FV0 AC008556.1-201ENST00000610908 2040 ntBASIC16.29■□□□□ 0.2
LRRC46Q96FV0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms