Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.1■□□□□ 0.49
SIPA1Q96FS4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 FGFR3P6-201ENST00000457012 610 ntBASIC18.1■□□□□ 0.49
SIPA1Q96FS4 SCARNA2-201ENST00000458748 420 ntBASIC18.1■□□□□ 0.49
SIPA1Q96FS4 RNPS1P1-201ENST00000507437 918 ntBASIC18.1■□□□□ 0.49
SIPA1Q96FS4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 AF228730.7-201ENST00000641842 219 ntBASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
SIPA1Q96FS4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.09■□□□□ 0.49
SIPA1Q96FS4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 AP001269.4-201ENST00000609611 512 ntBASIC18.09■□□□□ 0.49
SIPA1Q96FS4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIPA1Q96FS4 GMCL1P1-201ENST00000463439 1581 ntBASIC18.08■□□□□ 0.49
SIPA1Q96FS4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.08■□□□□ 0.49
SIPA1Q96FS4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 AC018712.1-201ENST00000455767 687 ntBASIC18.08■□□□□ 0.48
SIPA1Q96FS4 AC112698.1-201ENST00000510299 916 ntBASIC18.08■□□□□ 0.48
SIPA1Q96FS4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.08■□□□□ 0.48
SIPA1Q96FS4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.07■□□□□ 0.48
SIPA1Q96FS4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms