Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
ARRDC3Q96B67 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18■□□□□ 0.47
ARRDC3Q96B67 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 AC011467.2-201ENST00000598425 242 ntBASIC18■□□□□ 0.47
ARRDC3Q96B67 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18■□□□□ 0.47
ARRDC3Q96B67 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18■□□□□ 0.47
ARRDC3Q96B67 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 AL096828.2-201ENST00000567259 1965 ntBASIC18■□□□□ 0.47
ARRDC3Q96B67 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 INTS4P1-201ENST00000438455 1935 ntBASIC18■□□□□ 0.47
ARRDC3Q96B67 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ARRDC3Q96B67 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 AC135776.1-201ENST00000319817 2481 ntBASIC17.99■□□□□ 0.47
ARRDC3Q96B67 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 AP002469.2-201ENST00000531724 424 ntBASIC17.99■□□□□ 0.47
ARRDC3Q96B67 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 KRT8P47-201ENST00000604727 1398 ntBASIC17.99■□□□□ 0.47
ARRDC3Q96B67 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARRDC3Q96B67 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 TP73-AS1-207ENST00000624167 988 ntBASIC17.98■□□□□ 0.47
ARRDC3Q96B67 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARRDC3Q96B67 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ARRDC3Q96B67 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms