Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 AC023274.1-201ENST00000418278 595 ntBASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 AC009947.1-201ENST00000444350 727 ntBASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 AC009154.2-201ENST00000621177 724 ntBASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SNIP1Q8TAD8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNIP1Q8TAD8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNIP1Q8TAD8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNIP1Q8TAD8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNIP1Q8TAD8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.02■□□□□ 0.31
SNIP1Q8TAD8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 AP002414.3-201ENST00000589352 1468 ntBASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 MTDHP4-201ENST00000600287 670 ntBASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNIP1Q8TAD8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 PON3-203ENST00000427422 894 ntTSL 3 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 MTCL1P1-201ENST00000446207 792 ntBASIC17■□□□□ 0.31
SNIP1Q8TAD8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 AL596442.2-201ENST00000610240 980 ntBASIC17■□□□□ 0.31
SNIP1Q8TAD8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 IRX1P1-201ENST00000438849 1838 ntBASIC17■□□□□ 0.31
SNIP1Q8TAD8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17■□□□□ 0.31
SNIP1Q8TAD8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SNIP1Q8TAD8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MIR149-201ENST00000384879 89 ntBASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 MCCD1P2-201ENST00000423228 335 ntBASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 YBX1P5-201ENST00000509441 847 ntBASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.99■□□□□ 0.31
SNIP1Q8TAD8 NKAPP1-205ENST00000585790 367 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms