Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 AP000974.1-201ENST00000623909 2387 ntBASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC027601.4-201ENST00000611259 610 ntBASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC116407.3-201ENST00000623905 1129 ntBASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF248Q8NDW4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 AC098831.1-202ENST00000438821 336 ntBASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 AL355385.1-201ENST00000606123 409 ntBASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 AC083906.6-201ENST00000641366 219 ntBASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 AC079781.4-201ENST00000641908 219 ntBASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF248Q8NDW4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF248Q8NDW4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 UPF3AP3-201ENST00000420996 769 ntBASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 PMS2P2-201ENST00000425039 1128 ntBASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 PGAM5P1-201ENST00000518923 814 ntBASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF248Q8NDW4 AC140113.2-201ENST00000604370 208 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms