Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 AP002414.3-201ENST00000589352 1468 ntBASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 AC079776.2-201ENST00000641154 1609 ntBASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPAS4Q8IUM7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 AL022326.1-202ENST00000641533 845 ntBASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.31■□□□□ 0.68
NPAS4Q8IUM7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 UPF3AP3-201ENST00000420996 769 ntBASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 BX005266.1-201ENST00000473402 457 ntBASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AC122714.2-201ENST00000502787 707 ntBASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AL691403.2-201ENST00000618460 490 ntBASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 PMPCAP1-201ENST00000508114 1576 ntBASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
NPAS4Q8IUM7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 AC073592.4-201ENST00000623827 446 ntBASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.29■□□□□ 0.68
NPAS4Q8IUM7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NPAS4Q8IUM7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms