Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 AC008667.4-201ENST00000607370 168 ntBASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCRAQ6ISU1 AC112907.3-201ENST00000577781 2400 ntBASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 AD001527.2-201ENST00000622994 785 ntBASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 KRT8P47-201ENST00000604727 1398 ntBASIC18.54■□□□□ 0.56
PTCRAQ6ISU1 BCAR1-209ENST00000546196 1340 ntBASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 RPS15P9-201ENST00000494093 319 ntBASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 AJ011932.1-201ENST00000621707 465 ntBASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 Z92544.3-201ENST00000624747 417 ntBASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 AL513210.1-201ENST00000629608 234 ntBASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PTCRAQ6ISU1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 IGLL3P-201ENST00000412472 434 ntBASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 FAM86GP-201ENST00000448322 971 ntBASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 RNA5SP421-201ENST00000516864 134 ntBASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 KRT19P2-202ENST00000557173 1012 ntBASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PTCRAQ6ISU1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCRAQ6ISU1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCRAQ6ISU1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCRAQ6ISU1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCRAQ6ISU1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTCRAQ6ISU1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTCRAQ6ISU1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AC004461.1-201ENST00000412461 403 ntBASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AC109322.1-201ENST00000524499 1264 ntBASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AC012645.4-201ENST00000610691 1061 ntBASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 AC010507.1-201ENST00000633895 436 ntBASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.51■□□□□ 0.55
PTCRAQ6ISU1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms