Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 AL359075.1-203ENST00000462729 1002 ntBASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 KRT18P41-201ENST00000518924 1277 ntBASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 AL031432.5-201ENST00000641059 760 ntBASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KHDC1Q4VXA5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 AC080080.1-201ENST00000625121 2420 ntBASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
KHDC1Q4VXA5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 AC104390.1-201ENST00000555663 520 ntBASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KHDC1Q4VXA5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 FAM8A6P-201ENST00000407496 1135 ntBASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 NTF6B-201ENST00000591913 560 ntBASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KHDC1Q4VXA5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms