Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-BQ31612 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-BQ31612 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
HLA-BQ31612 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-BQ31612 AL022326.1-202ENST00000641533 845 ntBASIC17.5■□□□□ 0.39
HLA-BQ31612 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-BQ31612 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HLA-BQ31612 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-BQ31612 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-BQ31612 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-BQ31612 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.49■□□□□ 0.39
HLA-BQ31612 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HLA-BQ31612 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
HLA-BQ31612 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-BQ31612 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
HLA-BQ31612 AC027796.2-201ENST00000575326 344 ntBASIC17.49■□□□□ 0.39
HLA-BQ31612 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-BQ31612 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-BQ31612 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 MIR1199-201ENST00000621445 119 ntBASIC17.49■□□□□ 0.39
HLA-BQ31612 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-BQ31612 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-BQ31612 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-BQ31612 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HLA-BQ31612 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-BQ31612 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-BQ31612 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HLA-BQ31612 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-BQ31612 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-BQ31612 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
HLA-BQ31612 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-BQ31612 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-BQ31612 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-BQ31612 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-BQ31612 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-BQ31612 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-BQ31612 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-BQ31612 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HLA-BQ31612 MTDHP5-201ENST00000598980 586 ntBASIC17.48■□□□□ 0.39
HLA-BQ31612 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 AC005593.1-201ENST00000624894 515 ntBASIC17.48■□□□□ 0.39
HLA-BQ31612 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-BQ31612 PMPCAP1-201ENST00000508114 1576 ntBASIC17.48■□□□□ 0.39
HLA-BQ31612 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-BQ31612 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-BQ31612 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HLA-BQ31612 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 AC005332.7-201ENST00000614046 2005 ntBASIC17.47■□□□□ 0.39
HLA-BQ31612 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms