Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-1P78426 CHCHD2P8-201ENST00000429873 447 ntBASIC15.96■□□□□ 0.15
NKX6-1P78426 AC009078.2-202ENST00000463353 338 ntBASIC15.96■□□□□ 0.15
NKX6-1P78426 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.96■□□□□ 0.15
NKX6-1P78426 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.96■□□□□ 0.15
NKX6-1P78426 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.96■□□□□ 0.15
NKX6-1P78426 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.96■□□□□ 0.15
NKX6-1P78426 AL121772.3-201ENST00000610840 674 ntBASIC15.96■□□□□ 0.15
NKX6-1P78426 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-1P78426 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
NKX6-1P78426 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NKX6-1P78426 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NKX6-1P78426 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.96■□□□□ 0.15
NKX6-1P78426 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-1P78426 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
NKX6-1P78426 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-1P78426 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-1P78426 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
NKX6-1P78426 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.96■□□□□ 0.14
NKX6-1P78426 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-1P78426 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-1P78426 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
NKX6-1P78426 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NKX6-1P78426 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX6-1P78426 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX6-1P78426 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NKX6-1P78426 KRT8P50-201ENST00000562022 1438 ntBASIC15.95■□□□□ 0.14
NKX6-1P78426 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX6-1P78426 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.95■□□□□ 0.14
NKX6-1P78426 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX6-1P78426 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NKX6-1P78426 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX6-1P78426 AC091304.2-201ENST00000564639 760 ntBASIC15.95■□□□□ 0.14
NKX6-1P78426 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.95■□□□□ 0.14
NKX6-1P78426 AL031008.1-201ENST00000619963 541 ntBASIC15.95■□□□□ 0.14
NKX6-1P78426 AL157888.1-201ENST00000631930 593 ntBASIC15.95■□□□□ 0.14
NKX6-1P78426 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NKX6-1P78426 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 FER1L4-210ENST00000615531 5998 ntBASIC15.95■□□□□ 0.14
NKX6-1P78426 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-1P78426 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
NKX6-1P78426 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX6-1P78426 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NKX6-1P78426 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NKX6-1P78426 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 AP000593.1-201ENST00000393668 712 ntBASIC15.94■□□□□ 0.14
NKX6-1P78426 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.94■□□□□ 0.14
NKX6-1P78426 AL160237.2-201ENST00000556165 472 ntBASIC15.94■□□□□ 0.14
NKX6-1P78426 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 AL162741.1-201ENST00000565563 1558 ntBASIC15.94■□□□□ 0.14
NKX6-1P78426 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NKX6-1P78426 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NKX6-1P78426 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
NKX6-1P78426 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-1P78426 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX6-1P78426 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms