Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CXCL12P48061 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CXCL12P48061 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.94■□□□□ 0.46
CXCL12P48061 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CXCL12P48061 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CXCL12P48061 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.94■□□□□ 0.46
CXCL12P48061 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.94■□□□□ 0.46
CXCL12P48061 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.94■□□□□ 0.46
CXCL12P48061 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.94■□□□□ 0.46
CXCL12P48061 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CXCL12P48061 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CXCL12P48061 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.94■□□□□ 0.46
CXCL12P48061 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CXCL12P48061 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.93■□□□□ 0.46
CXCL12P48061 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 AL161938.1-201ENST00000569833 2180 ntBASIC17.93■□□□□ 0.46
CXCL12P48061 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.93■□□□□ 0.46
CXCL12P48061 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CXCL12P48061 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CXCL12P48061 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CXCL12P48061 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.93■□□□□ 0.46
CXCL12P48061 C20orf181-201ENST00000623918 480 ntBASIC17.93■□□□□ 0.46
CXCL12P48061 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CXCL12P48061 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CXCL12P48061 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.93■□□□□ 0.46
CXCL12P48061 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CXCL12P48061 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.92■□□□□ 0.46
CXCL12P48061 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CXCL12P48061 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CXCL12P48061 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 SIGLEC16-201ENST00000599858 1437 ntBASIC17.92■□□□□ 0.46
CXCL12P48061 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CXCL12P48061 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.92■□□□□ 0.46
CXCL12P48061 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.92■□□□□ 0.46
CXCL12P48061 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CXCL12P48061 AL645939.2-201ENST00000427340 991 ntBASIC17.92■□□□□ 0.46
CXCL12P48061 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.92■□□□□ 0.46
CXCL12P48061 AC122714.2-201ENST00000502787 707 ntBASIC17.92■□□□□ 0.46
CXCL12P48061 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CXCL12P48061 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.92■□□□□ 0.46
CXCL12P48061 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.92■□□□□ 0.46
CXCL12P48061 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.92■□□□□ 0.46
CXCL12P48061 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CXCL12P48061 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CXCL12P48061 AL589182.2-201ENST00000619332 1049 ntBASIC17.92■□□□□ 0.46
CXCL12P48061 AD001527.2-201ENST00000622994 785 ntBASIC17.92■□□□□ 0.46
CXCL12P48061 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CXCL12P48061 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.92■□□□□ 0.46
CXCL12P48061 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CXCL12P48061 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 AC093484.2-201ENST00000580996 2166 ntBASIC17.91■□□□□ 0.46
CXCL12P48061 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CXCL12P48061 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.91■□□□□ 0.46
CXCL12P48061 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.91■□□□□ 0.46
CXCL12P48061 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.91■□□□□ 0.46
CXCL12P48061 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.91■□□□□ 0.46
CXCL12P48061 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.91■□□□□ 0.46
CXCL12P48061 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CXCL12P48061 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms