Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC31.74■■■□□ 2.67
NCAPD3P42695 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
NCAPD3P42695 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NCAPD3P42695 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NCAPD3P42695 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC31.74■■■□□ 2.67
NCAPD3P42695 AC069262.1-201ENST00000539058 672 ntBASIC31.74■■■□□ 2.67
NCAPD3P42695 AC005225.4-201ENST00000557330 545 ntBASIC31.74■■■□□ 2.67
NCAPD3P42695 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NCAPD3P42695 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
NCAPD3P42695 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC31.74■■■□□ 2.67
NCAPD3P42695 POLI-202ENST00000406285 2030 ntTSL 2 BASIC31.74■■■□□ 2.67
NCAPD3P42695 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NCAPD3P42695 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NCAPD3P42695 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC31.73■■■□□ 2.67
NCAPD3P42695 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
NCAPD3P42695 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NCAPD3P42695 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
NCAPD3P42695 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC31.73■■■□□ 2.67
NCAPD3P42695 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
NCAPD3P42695 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC31.73■■■□□ 2.67
NCAPD3P42695 AC093520.2-201ENST00000561830 333 ntBASIC31.73■■■□□ 2.67
NCAPD3P42695 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
NCAPD3P42695 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NCAPD3P42695 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC31.73■■■□□ 2.67
NCAPD3P42695 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NCAPD3P42695 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
NCAPD3P42695 MIR661-201ENST00000384842 89 ntBASIC31.72■■■□□ 2.67
NCAPD3P42695 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC31.72■■■□□ 2.67
NCAPD3P42695 LINC00628-201ENST00000628516 1289 ntBASIC31.72■■■□□ 2.67
NCAPD3P42695 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC31.72■■■□□ 2.67
NCAPD3P42695 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NCAPD3P42695 AC025580.3-201ENST00000617932 1424 ntBASIC31.72■■■□□ 2.67
NCAPD3P42695 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
NCAPD3P42695 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NCAPD3P42695 AC063926.2-201ENST00000623766 1308 ntBASIC31.72■■■□□ 2.67
NCAPD3P42695 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
NCAPD3P42695 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
NCAPD3P42695 PMS2P4-201ENST00000412466 1052 ntBASIC31.72■■■□□ 2.67
NCAPD3P42695 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC31.72■■■□□ 2.67
NCAPD3P42695 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC31.72■■■□□ 2.67
NCAPD3P42695 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC31.72■■■□□ 2.67
NCAPD3P42695 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC31.72■■■□□ 2.67
NCAPD3P42695 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
NCAPD3P42695 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
NCAPD3P42695 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC31.71■■■□□ 2.67
NCAPD3P42695 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NCAPD3P42695 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
NCAPD3P42695 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
NCAPD3P42695 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC31.71■■■□□ 2.67
NCAPD3P42695 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 LINC01006-201ENST00000333319 2292 ntBASIC31.7■■■□□ 2.67
NCAPD3P42695 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
NCAPD3P42695 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC31.7■■■□□ 2.67
NCAPD3P42695 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
NCAPD3P42695 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NCAPD3P42695 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
NCAPD3P42695 HLA-DRB6-201ENST00000411500 1235 ntBASIC31.7■■■□□ 2.66
NCAPD3P42695 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC31.7■■■□□ 2.66
NCAPD3P42695 PON3-205ENST00000451904 1053 ntTSL 3 BASIC31.7■■■□□ 2.66
NCAPD3P42695 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC31.7■■■□□ 2.66
NCAPD3P42695 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC31.7■■■□□ 2.66
NCAPD3P42695 YTHDF3-AS1-201ENST00000603538 718 ntBASIC31.7■■■□□ 2.66
NCAPD3P42695 AC068137.2-201ENST00000605408 478 ntBASIC31.7■■■□□ 2.66
NCAPD3P42695 REXO1L3P-201ENST00000622202 1288 ntBASIC31.7■■■□□ 2.66
NCAPD3P42695 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC31.7■■■□□ 2.66
NCAPD3P42695 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
NCAPD3P42695 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC31.7■■■□□ 2.66
NCAPD3P42695 FAM86GP-201ENST00000448322 971 ntBASIC31.69■■■□□ 2.66
NCAPD3P42695 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NCAPD3P42695 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NCAPD3P42695 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
NCAPD3P42695 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
NCAPD3P42695 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC31.69■■■□□ 2.66
NCAPD3P42695 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NCAPD3P42695 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
NCAPD3P42695 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC31.69■■■□□ 2.66
NCAPD3P42695 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NCAPD3P42695 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
NCAPD3P42695 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC31.68■■■□□ 2.66
NCAPD3P42695 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NCAPD3P42695 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC31.68■■■□□ 2.66
NCAPD3P42695 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC31.68■■■□□ 2.66
NCAPD3P42695 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC31.68■■■□□ 2.66
NCAPD3P42695 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC31.68■■■□□ 2.66
NCAPD3P42695 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC31.68■■■□□ 2.66
NCAPD3P42695 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NCAPD3P42695 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
NCAPD3P42695 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
NCAPD3P42695 AL049757.1-201ENST00000616842 1596 ntBASIC31.68■■■□□ 2.66
NCAPD3P42695 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
NCAPD3P42695 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
NCAPD3P42695 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NCAPD3P42695 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms