Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 AC020763.4-201ENST00000623414 4170 ntBASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB40ALP0C0E4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RAB40ALP0C0E4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 AKR1C7P-201ENST00000305623 895 ntBASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 AC068472.1-201ENST00000474589 881 ntBASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 BNIP3P18-201ENST00000593976 575 ntBASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 AL591684.3-201ENST00000605187 298 ntBASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 AC009154.2-201ENST00000621177 724 ntBASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 CROCCP3-202ENST00000420820 1947 ntBASIC17.04■□□□□ 0.32
RAB40ALP0C0E4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 AC090340.1-201ENST00000620778 4980 ntBASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 MIR5100-201ENST00000579544 119 ntBASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 AC114341.1-201ENST00000618070 349 ntBASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40ALP0C0E4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms