Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.68■■□□□ 1.38
COL5A2P05997 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 IGHV3-65-201ENST00000523210 341 ntBASIC23.68■■□□□ 1.38
COL5A2P05997 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.68■■□□□ 1.38
COL5A2P05997 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC23.68■■□□□ 1.38
COL5A2P05997 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 AC008667.4-201ENST00000607370 168 ntBASIC23.68■■□□□ 1.38
COL5A2P05997 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.68■■□□□ 1.38
COL5A2P05997 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
COL5A2P05997 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COL5A2P05997 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.68■■□□□ 1.38
COL5A2P05997 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A2P05997 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.68■■□□□ 1.38
COL5A2P05997 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.68■■□□□ 1.38
COL5A2P05997 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC23.68■■□□□ 1.38
COL5A2P05997 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COL5A2P05997 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL5A2P05997 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
COL5A2P05997 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.67■■□□□ 1.38
COL5A2P05997 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.67■■□□□ 1.38
COL5A2P05997 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.67■■□□□ 1.38
COL5A2P05997 CD82-202ENST00000342935 967 ntTSL 5 BASIC23.67■■□□□ 1.38
COL5A2P05997 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC23.67■■□□□ 1.38
COL5A2P05997 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL5A2P05997 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.67■■□□□ 1.38
COL5A2P05997 FAM8A3P-201ENST00000427218 844 ntBASIC23.67■■□□□ 1.38
COL5A2P05997 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC23.67■■□□□ 1.38
COL5A2P05997 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC23.67■■□□□ 1.38
COL5A2P05997 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
COL5A2P05997 VN2R19P-201ENST00000442399 1052 ntBASIC23.67■■□□□ 1.38
COL5A2P05997 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.67■■□□□ 1.38
COL5A2P05997 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC23.67■■□□□ 1.38
COL5A2P05997 NCF1C-201ENST00000438382 1427 ntBASIC23.67■■□□□ 1.38
COL5A2P05997 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23.66■■□□□ 1.38
COL5A2P05997 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC23.66■■□□□ 1.38
COL5A2P05997 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC23.66■■□□□ 1.38
COL5A2P05997 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL5A2P05997 RPS15P9-201ENST00000494093 319 ntBASIC23.66■■□□□ 1.38
COL5A2P05997 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
COL5A2P05997 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC23.66■■□□□ 1.38
COL5A2P05997 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
COL5A2P05997 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC23.66■■□□□ 1.38
COL5A2P05997 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC23.66■■□□□ 1.38
COL5A2P05997 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.66■■□□□ 1.38
COL5A2P05997 AC010507.1-201ENST00000633895 436 ntBASIC23.66■■□□□ 1.38
COL5A2P05997 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
COL5A2P05997 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
COL5A2P05997 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC23.65■■□□□ 1.38
COL5A2P05997 AL035633.1-201ENST00000406139 838 ntBASIC23.65■■□□□ 1.38
COL5A2P05997 ATP6V0CP3-201ENST00000417255 467 ntBASIC23.65■■□□□ 1.38
COL5A2P05997 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
COL5A2P05997 RIN3-211ENST00000557762 517 ntTSL 3 BASIC23.65■■□□□ 1.38
COL5A2P05997 PDPK2P-202ENST00000562415 1191 ntBASIC23.65■■□□□ 1.38
COL5A2P05997 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
COL5A2P05997 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.65■■□□□ 1.38
COL5A2P05997 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
COL5A2P05997 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.65■■□□□ 1.38
COL5A2P05997 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL5A2P05997 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC23.64■■□□□ 1.38
COL5A2P05997 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL5A2P05997 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL5A2P05997 AL020989.1-201ENST00000422979 469 ntBASIC23.64■■□□□ 1.38
COL5A2P05997 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC23.64■■□□□ 1.38
COL5A2P05997 SPCS2P1-201ENST00000561636 679 ntBASIC23.64■■□□□ 1.38
COL5A2P05997 AC106028.4-201ENST00000614509 607 ntBASIC23.64■■□□□ 1.38
COL5A2P05997 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms