Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
COL1A1P02452 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.69■■□□□ 1.06
COL1A1P02452 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COL1A1P02452 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.69■■□□□ 1.06
COL1A1P02452 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 TERC-201ENST00000602385 541 ntBASIC21.69■■□□□ 1.06
COL1A1P02452 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.69■■□□□ 1.06
COL1A1P02452 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL1A1P02452 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
COL1A1P02452 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.68■■□□□ 1.06
COL1A1P02452 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.68■■□□□ 1.06
COL1A1P02452 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.68■■□□□ 1.06
COL1A1P02452 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.68■■□□□ 1.06
COL1A1P02452 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.68■■□□□ 1.06
COL1A1P02452 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.68■■□□□ 1.06
COL1A1P02452 MTDHP3-201ENST00000594186 672 ntBASIC21.68■■□□□ 1.06
COL1A1P02452 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.68■■□□□ 1.06
COL1A1P02452 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL1A1P02452 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
COL1A1P02452 ZNF259P1-201ENST00000407656 1365 ntBASIC21.67■■□□□ 1.06
COL1A1P02452 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.67■■□□□ 1.06
COL1A1P02452 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.67■■□□□ 1.06
COL1A1P02452 AP005117.1-201ENST00000584346 1413 ntBASIC21.67■■□□□ 1.06
COL1A1P02452 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A1P02452 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
COL1A1P02452 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.67■■□□□ 1.06
COL1A1P02452 ABCD1P5-201ENST00000445663 754 ntBASIC21.67■■□□□ 1.06
COL1A1P02452 AC092183.1-201ENST00000469884 875 ntBASIC21.67■■□□□ 1.06
COL1A1P02452 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.67■■□□□ 1.06
COL1A1P02452 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A1P02452 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
COL1A1P02452 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A1P02452 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.67■■□□□ 1.06
COL1A1P02452 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.67■■□□□ 1.06
COL1A1P02452 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.67■■□□□ 1.06
COL1A1P02452 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A1P02452 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.67■■□□□ 1.06
COL1A1P02452 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL1A1P02452 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.66■■□□□ 1.06
COL1A1P02452 AC100803.2-201ENST00000562459 1963 ntBASIC21.66■■□□□ 1.06
COL1A1P02452 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
COL1A1P02452 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
COL1A1P02452 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.66■■□□□ 1.06
COL1A1P02452 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.66■■□□□ 1.06
COL1A1P02452 RPL13AP23-201ENST00000480739 586 ntBASIC21.66■■□□□ 1.06
COL1A1P02452 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.66■■□□□ 1.06
COL1A1P02452 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.66■■□□□ 1.06
COL1A1P02452 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL1A1P02452 AC135776.1-201ENST00000319817 2481 ntBASIC21.66■■□□□ 1.06
COL1A1P02452 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A1P02452 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL1A1P02452 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.65■■□□□ 1.06
COL1A1P02452 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 AC096633.1-201ENST00000422446 749 ntBASIC21.65■■□□□ 1.06
COL1A1P02452 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A1P02452 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.65■■□□□ 1.06
COL1A1P02452 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.65■■□□□ 1.06
COL1A1P02452 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL1A1P02452 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL1A1P02452 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
COL1A1P02452 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL1A1P02452 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL1A1P02452 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms