Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLPTM1O96005 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 POM121L13P-201ENST00000422362 380 ntBASIC17.11■□□□□ 0.33
CLPTM1O96005 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.11■□□□□ 0.33
CLPTM1O96005 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.11■□□□□ 0.33
CLPTM1O96005 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.11■□□□□ 0.33
CLPTM1O96005 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.11■□□□□ 0.33
CLPTM1O96005 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.11■□□□□ 0.33
CLPTM1O96005 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.11■□□□□ 0.33
CLPTM1O96005 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLPTM1O96005 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.11■□□□□ 0.33
CLPTM1O96005 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLPTM1O96005 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLPTM1O96005 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLPTM1O96005 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.1■□□□□ 0.33
CLPTM1O96005 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.1■□□□□ 0.33
CLPTM1O96005 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.1■□□□□ 0.33
CLPTM1O96005 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 PRORSD1P-201ENST00000295112 541 ntBASIC17.1■□□□□ 0.33
CLPTM1O96005 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CLPTM1O96005 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.1■□□□□ 0.33
CLPTM1O96005 RPS2P52-201ENST00000469610 820 ntBASIC17.1■□□□□ 0.33
CLPTM1O96005 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.1■□□□□ 0.33
CLPTM1O96005 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.1■□□□□ 0.33
CLPTM1O96005 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.1■□□□□ 0.33
CLPTM1O96005 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.1■□□□□ 0.33
CLPTM1O96005 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLPTM1O96005 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
CLPTM1O96005 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.09■□□□□ 0.33
CLPTM1O96005 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.09■□□□□ 0.33
CLPTM1O96005 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.09■□□□□ 0.33
CLPTM1O96005 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.09■□□□□ 0.33
CLPTM1O96005 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.09■□□□□ 0.33
CLPTM1O96005 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.09■□□□□ 0.33
CLPTM1O96005 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLPTM1O96005 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.09■□□□□ 0.33
CLPTM1O96005 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLPTM1O96005 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.09■□□□□ 0.33
CLPTM1O96005 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.09■□□□□ 0.33
CLPTM1O96005 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLPTM1O96005 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLPTM1O96005 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.09■□□□□ 0.33
CLPTM1O96005 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CLPTM1O96005 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLPTM1O96005 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLPTM1O96005 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLPTM1O96005 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLPTM1O96005 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms