Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MBD4O95243 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.55■■□□□ 1.04
MBD4O95243 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
MBD4O95243 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 MINOS1P3-201ENST00000457048 203 ntBASIC21.55■■□□□ 1.04
MBD4O95243 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.55■■□□□ 1.04
MBD4O95243 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.55■■□□□ 1.04
MBD4O95243 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.55■■□□□ 1.04
MBD4O95243 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MBD4O95243 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
MBD4O95243 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
MBD4O95243 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 BNIP3P18-201ENST00000593976 575 ntBASIC21.54■■□□□ 1.04
MBD4O95243 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.54■■□□□ 1.04
MBD4O95243 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.54■■□□□ 1.04
MBD4O95243 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.54■■□□□ 1.04
MBD4O95243 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.54■■□□□ 1.04
MBD4O95243 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MBD4O95243 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.54■■□□□ 1.04
MBD4O95243 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MBD4O95243 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.53■■□□□ 1.04
MBD4O95243 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.53■■□□□ 1.04
MBD4O95243 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
MBD4O95243 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MBD4O95243 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.53■■□□□ 1.04
MBD4O95243 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 TSPY19P-201ENST00000418461 509 ntBASIC21.53■■□□□ 1.04
MBD4O95243 TSPY18P-201ENST00000441642 509 ntBASIC21.53■■□□□ 1.04
MBD4O95243 UNC93B7-201ENST00000509439 705 ntBASIC21.53■■□□□ 1.04
MBD4O95243 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.53■■□□□ 1.04
MBD4O95243 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.53■■□□□ 1.04
MBD4O95243 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.53■■□□□ 1.04
MBD4O95243 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.53■■□□□ 1.04
MBD4O95243 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MBD4O95243 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.53■■□□□ 1.04
MBD4O95243 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MBD4O95243 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MBD4O95243 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MBD4O95243 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.53■■□□□ 1.04
MBD4O95243 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.53■■□□□ 1.04
MBD4O95243 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.53■■□□□ 1.04
MBD4O95243 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
MBD4O95243 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MBD4O95243 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MBD4O95243 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
MBD4O95243 NUS1P2-201ENST00000417358 873 ntBASIC21.52■■□□□ 1.04
MBD4O95243 DUTP2-201ENST00000519164 463 ntBASIC21.52■■□□□ 1.04
MBD4O95243 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.52■■□□□ 1.04
MBD4O95243 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.52■■□□□ 1.04
MBD4O95243 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.52■■□□□ 1.04
MBD4O95243 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MBD4O95243 AL121894.2-201ENST00000602977 491 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms