Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRPF40AO75400 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PRPF40AO75400 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.08■□□□□ 0.97
PRPF40AO75400 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRPF40AO75400 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PRPF40AO75400 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRPF40AO75400 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRPF40AO75400 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRPF40AO75400 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PRPF40AO75400 NIFKP9-201ENST00000419265 221 ntBASIC21.08■□□□□ 0.97
PRPF40AO75400 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.08■□□□□ 0.97
PRPF40AO75400 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PRPF40AO75400 SDHAP2-201ENST00000455183 2001 ntBASIC21.08■□□□□ 0.97
PRPF40AO75400 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.08■□□□□ 0.97
PRPF40AO75400 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.08■□□□□ 0.97
PRPF40AO75400 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRPF40AO75400 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRPF40AO75400 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRPF40AO75400 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRPF40AO75400 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.08■□□□□ 0.96
PRPF40AO75400 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
PRPF40AO75400 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.08■□□□□ 0.96
PRPF40AO75400 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRPF40AO75400 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRPF40AO75400 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.08■□□□□ 0.96
PRPF40AO75400 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRPF40AO75400 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.08■□□□□ 0.96
PRPF40AO75400 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.07■□□□□ 0.96
PRPF40AO75400 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.07■□□□□ 0.96
PRPF40AO75400 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
PRPF40AO75400 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.07■□□□□ 0.96
PRPF40AO75400 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.07■□□□□ 0.96
PRPF40AO75400 AL353708.3-201ENST00000610272 989 ntBASIC21.07■□□□□ 0.96
PRPF40AO75400 KRT18P55-202ENST00000578578 1546 ntBASIC21.07■□□□□ 0.96
PRPF40AO75400 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.07■□□□□ 0.96
PRPF40AO75400 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRPF40AO75400 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.07■□□□□ 0.96
PRPF40AO75400 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.07■□□□□ 0.96
PRPF40AO75400 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PRPF40AO75400 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF40AO75400 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.06■□□□□ 0.96
PRPF40AO75400 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.06■□□□□ 0.96
PRPF40AO75400 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PRPF40AO75400 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRPF40AO75400 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
PRPF40AO75400 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF40AO75400 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.06■□□□□ 0.96
PRPF40AO75400 AC011298.2-201ENST00000617989 482 ntBASIC21.06■□□□□ 0.96
PRPF40AO75400 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 LINC00602-201ENST00000629776 2065 ntBASIC21.06■□□□□ 0.96
PRPF40AO75400 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PRPF40AO75400 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRPF40AO75400 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
PRPF40AO75400 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF40AO75400 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF40AO75400 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PRPF40AO75400 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF40AO75400 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF40AO75400 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPF40AO75400 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms