Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTNND1O60716 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CTNND1O60716 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CTNND1O60716 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CTNND1O60716 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CTNND1O60716 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.07■□□□□ 0.96
CTNND1O60716 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.07■□□□□ 0.96
CTNND1O60716 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 AC005082.1-201ENST00000413042 2259 ntBASIC21.07■□□□□ 0.96
CTNND1O60716 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.07■□□□□ 0.96
CTNND1O60716 FAM220CP-201ENST00000395253 831 ntBASIC21.07■□□□□ 0.96
CTNND1O60716 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CTNND1O60716 AC012640.2-201ENST00000561606 901 ntBASIC21.07■□□□□ 0.96
CTNND1O60716 AP000867.4-201ENST00000641616 219 ntBASIC21.07■□□□□ 0.96
CTNND1O60716 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.07■□□□□ 0.96
CTNND1O60716 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTNND1O60716 ANO7L1-203ENST00000602586 1720 ntBASIC21.07■□□□□ 0.96
CTNND1O60716 GMCL1P1-201ENST00000463439 1581 ntBASIC21.06■□□□□ 0.96
CTNND1O60716 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
CTNND1O60716 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.06■□□□□ 0.96
CTNND1O60716 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.06■□□□□ 0.96
CTNND1O60716 AC104109.2-201ENST00000602919 1418 ntBASIC21.06■□□□□ 0.96
CTNND1O60716 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CTNND1O60716 BX842568.4-201ENST00000421222 227 ntBASIC21.06■□□□□ 0.96
CTNND1O60716 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CTNND1O60716 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.06■□□□□ 0.96
CTNND1O60716 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CTNND1O60716 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CTNND1O60716 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.06■□□□□ 0.96
CTNND1O60716 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.06■□□□□ 0.96
CTNND1O60716 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.06■□□□□ 0.96
CTNND1O60716 NKAPP1-205ENST00000585790 367 ntBASIC21.06■□□□□ 0.96
CTNND1O60716 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.06■□□□□ 0.96
CTNND1O60716 AC008735.5-201ENST00000623544 497 ntBASIC21.06■□□□□ 0.96
CTNND1O60716 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.06■□□□□ 0.96
CTNND1O60716 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.06■□□□□ 0.96
CTNND1O60716 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CTNND1O60716 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.06■□□□□ 0.96
CTNND1O60716 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTNND1O60716 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.05■□□□□ 0.96
CTNND1O60716 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNND1O60716 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CTNND1O60716 AIRN-201ENST00000601203 4374 ntBASIC21.05■□□□□ 0.96
CTNND1O60716 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNND1O60716 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.05■□□□□ 0.96
CTNND1O60716 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNND1O60716 MIR1233-2-201ENST00000408138 82 ntBASIC21.05■□□□□ 0.96
CTNND1O60716 MIR1233-1-201ENST00000408722 82 ntBASIC21.05■□□□□ 0.96
CTNND1O60716 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.05■□□□□ 0.96
CTNND1O60716 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTNND1O60716 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.05■□□□□ 0.96
CTNND1O60716 PGAM5P1-201ENST00000518923 814 ntBASIC21.05■□□□□ 0.96
CTNND1O60716 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.05■□□□□ 0.96
CTNND1O60716 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTNND1O60716 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.05■□□□□ 0.96
CTNND1O60716 AC027601.4-201ENST00000611259 610 ntBASIC21.05■□□□□ 0.96
CTNND1O60716 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.05■□□□□ 0.96
CTNND1O60716 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CTNND1O60716 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNND1O60716 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTNND1O60716 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.05■□□□□ 0.96
CTNND1O60716 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.04■□□□□ 0.96
CTNND1O60716 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CTNND1O60716 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTNND1O60716 AC098831.1-202ENST00000438821 336 ntBASIC21.04■□□□□ 0.96
CTNND1O60716 AC092910.1-201ENST00000482027 1129 ntBASIC21.04■□□□□ 0.96
CTNND1O60716 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.04■□□□□ 0.96
CTNND1O60716 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.04■□□□□ 0.96
CTNND1O60716 AC034105.1-201ENST00000563488 319 ntBASIC21.04■□□□□ 0.96
CTNND1O60716 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.04■□□□□ 0.96
CTNND1O60716 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.04■□□□□ 0.96
CTNND1O60716 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.04■□□□□ 0.96
CTNND1O60716 MTDHP4-201ENST00000600287 670 ntBASIC21.04■□□□□ 0.96
CTNND1O60716 FAM197Y3-203ENST00000618346 717 ntBASIC21.04■□□□□ 0.96
CTNND1O60716 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CTNND1O60716 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CTNND1O60716 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms