Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.47■□□□□ 0.39
GFRA3O60609 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
GFRA3O60609 LINC01126-201ENST00000623515 1646 ntBASIC17.47■□□□□ 0.39
GFRA3O60609 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GFRA3O60609 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.47■□□□□ 0.39
GFRA3O60609 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 PIN1P1-201ENST00000412108 996 ntBASIC17.47■□□□□ 0.39
GFRA3O60609 SPDYE21P-201ENST00000413323 827 ntBASIC17.47■□□□□ 0.39
GFRA3O60609 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.47■□□□□ 0.39
GFRA3O60609 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.47■□□□□ 0.39
GFRA3O60609 AC005237.2-201ENST00000434368 219 ntBASIC17.47■□□□□ 0.39
GFRA3O60609 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.47■□□□□ 0.39
GFRA3O60609 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.47■□□□□ 0.39
GFRA3O60609 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.47■□□□□ 0.39
GFRA3O60609 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.47■□□□□ 0.39
GFRA3O60609 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.47■□□□□ 0.39
GFRA3O60609 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.47■□□□□ 0.39
GFRA3O60609 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.47■□□□□ 0.39
GFRA3O60609 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
GFRA3O60609 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GFRA3O60609 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GFRA3O60609 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA3O60609 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GFRA3O60609 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GFRA3O60609 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA3O60609 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
GFRA3O60609 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA3O60609 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA3O60609 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA3O60609 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
GFRA3O60609 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.46■□□□□ 0.39
GFRA3O60609 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA3O60609 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA3O60609 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.46■□□□□ 0.39
GFRA3O60609 RPS2P32-201ENST00000439199 892 ntBASIC17.46■□□□□ 0.39
GFRA3O60609 HILS1-202ENST00000545329 423 ntBASIC17.46■□□□□ 0.39
GFRA3O60609 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.46■□□□□ 0.39
GFRA3O60609 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA3O60609 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA3O60609 AC026310.3-201ENST00000625186 2373 ntBASIC17.46■□□□□ 0.39
GFRA3O60609 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
GFRA3O60609 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.46■□□□□ 0.39
GFRA3O60609 CU639417.3-201ENST00000624240 1404 ntBASIC17.46■□□□□ 0.39
GFRA3O60609 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
GFRA3O60609 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
GFRA3O60609 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA3O60609 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.45■□□□□ 0.38
GFRA3O60609 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GFRA3O60609 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GFRA3O60609 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA3O60609 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.45■□□□□ 0.38
GFRA3O60609 TREML5P-201ENST00000421694 576 ntBASIC17.45■□□□□ 0.38
GFRA3O60609 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.45■□□□□ 0.38
GFRA3O60609 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.45■□□□□ 0.38
GFRA3O60609 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.45■□□□□ 0.38
GFRA3O60609 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.45■□□□□ 0.38
GFRA3O60609 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA3O60609 AL132655.2-201ENST00000596276 594 ntBASIC17.45■□□□□ 0.38
GFRA3O60609 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.45■□□□□ 0.38
GFRA3O60609 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.45■□□□□ 0.38
GFRA3O60609 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GFRA3O60609 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
GFRA3O60609 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GFRA3O60609 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.44■□□□□ 0.38
GFRA3O60609 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.44■□□□□ 0.38
GFRA3O60609 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.44■□□□□ 0.38
GFRA3O60609 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.44■□□□□ 0.38
GFRA3O60609 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.44■□□□□ 0.38
GFRA3O60609 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.44■□□□□ 0.38
GFRA3O60609 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.44■□□□□ 0.38
GFRA3O60609 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.44■□□□□ 0.38
GFRA3O60609 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.44■□□□□ 0.38
GFRA3O60609 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GFRA3O60609 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GFRA3O60609 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms