Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
GRIN3BO60391 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GRIN3BO60391 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.94■■□□□ 1.1
GRIN3BO60391 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
GRIN3BO60391 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.94■■□□□ 1.1
GRIN3BO60391 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.94■■□□□ 1.1
GRIN3BO60391 LINC02560-201ENST00000596379 459 ntBASIC21.94■■□□□ 1.1
GRIN3BO60391 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.94■■□□□ 1.1
GRIN3BO60391 AC009102.3-201ENST00000623118 1491 ntBASIC21.94■■□□□ 1.1
GRIN3BO60391 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.94■■□□□ 1.1
GRIN3BO60391 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
GRIN3BO60391 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
GRIN3BO60391 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GRIN3BO60391 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GRIN3BO60391 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.93■■□□□ 1.1
GRIN3BO60391 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.93■■□□□ 1.1
GRIN3BO60391 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.93■■□□□ 1.1
GRIN3BO60391 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.93■■□□□ 1.1
GRIN3BO60391 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GRIN3BO60391 AC092667.1-201ENST00000434301 2586 ntBASIC21.93■■□□□ 1.1
GRIN3BO60391 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GRIN3BO60391 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.93■■□□□ 1.1
GRIN3BO60391 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.93■■□□□ 1.1
GRIN3BO60391 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.93■■□□□ 1.1
GRIN3BO60391 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.93■■□□□ 1.1
GRIN3BO60391 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.93■■□□□ 1.1
GRIN3BO60391 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GRIN3BO60391 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.93■■□□□ 1.1
GRIN3BO60391 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.93■■□□□ 1.1
GRIN3BO60391 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GRIN3BO60391 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.93■■□□□ 1.1
GRIN3BO60391 LINC00602-201ENST00000629776 2065 ntBASIC21.92■■□□□ 1.1
GRIN3BO60391 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.92■■□□□ 1.1
GRIN3BO60391 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.92■■□□□ 1.1
GRIN3BO60391 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.92■■□□□ 1.1
GRIN3BO60391 CNN2P2-201ENST00000443536 909 ntBASIC21.92■■□□□ 1.1
GRIN3BO60391 CNN2P3-201ENST00000450201 906 ntBASIC21.92■■□□□ 1.1
GRIN3BO60391 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GRIN3BO60391 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.92■■□□□ 1.1
GRIN3BO60391 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.92■■□□□ 1.1
GRIN3BO60391 AC112698.1-201ENST00000510299 916 ntBASIC21.92■■□□□ 1.1
GRIN3BO60391 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 AL136317.3-201ENST00000618497 906 ntBASIC21.92■■□□□ 1.1
GRIN3BO60391 AD001527.2-201ENST00000622994 785 ntBASIC21.92■■□□□ 1.1
GRIN3BO60391 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.92■■□□□ 1.1
GRIN3BO60391 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.92■■□□□ 1.1
GRIN3BO60391 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GRIN3BO60391 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.91■■□□□ 1.1
GRIN3BO60391 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GRIN3BO60391 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GRIN3BO60391 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GRIN3BO60391 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GRIN3BO60391 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.91■■□□□ 1.1
GRIN3BO60391 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GRIN3BO60391 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GRIN3BO60391 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
GRIN3BO60391 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.91■■□□□ 1.1
GRIN3BO60391 AC007967.3-201ENST00000434308 558 ntBASIC21.91■■□□□ 1.1
GRIN3BO60391 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.91■■□□□ 1.1
GRIN3BO60391 AC023141.13-201ENST00000604991 943 ntBASIC21.91■■□□□ 1.1
GRIN3BO60391 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
GRIN3BO60391 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
GRIN3BO60391 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.91■■□□□ 1.1
GRIN3BO60391 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.9■■□□□ 1.1
GRIN3BO60391 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 AL512408.1-201ENST00000569378 2000 ntBASIC21.9■■□□□ 1.1
GRIN3BO60391 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GRIN3BO60391 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.9■■□□□ 1.1
GRIN3BO60391 AC073130.3-201ENST00000624389 2278 ntBASIC21.9■■□□□ 1.1
GRIN3BO60391 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.9■■□□□ 1.1
GRIN3BO60391 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GRIN3BO60391 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms